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Publications

2012

Encounter dynamics of a small target by a polymer diffusing in a confined domain.
Amitai A, Amoruso C, Ziskind A, Holcman D
J Chem Phys. 2012 Dec 28. 137(24):244906.

Protocol : Chromatin immunoprecipitation (ChIP) methodology to investigate histone modifications in two model diatom species.
Lin X, Tirichine L, Bowler C
Plant Methods. 2012 Dec 7. 8(1):48.

CLIP-seq of eIF4AIII reveals transcriptome-wide mapping of the human exon junction complex.
Saulière J, Murigneux V, Wang Z, Marquenet E, Barbosa I, Le Tonquèze O, Audic Y, Paillard L, Roest Crollius H, Le Hir H
Nat Struct Mol Biol. 2012 Nov. 19(11):1124-31.

Measuring aberrations in the rat brain by coherence-gated wavefront sensing using a Linnik interferometer.
Wang J, Léger JF, Binding J, Boccara AC, Gigan S, Bourdieu L
Biomed Opt Express. 2012 Oct 1. 3(10):2510-25.

Analysis of human samples reveals impaired SHH-dependent cerebellar development in Joubert syndrome/Meckel syndrome.
Aguilar A, Meunier A, Strehl L, Martinovic J, Bonniere M, Attie‑Bitach T, Encha‑Razavi F, Spassky N
Proc Natl Acad Sci U S A. 2012 Oct 16. 109(42):16951-6.

Human CWC22 escorts the helicase eIF4AIII to spliceosomes and promotes exon junction complex assembly.
Barbosa I, Haque N, Fiorini F, Barrandon C, Tomasetto C, Blanchette M, Le Hir H
Nat Struct Mol Biol. 2012 Oct. 19(10):983-90.

Evolution in developmental phenotype space.
Félix MA
Curr Opin Genet Dev. 2012 Dec. 22(6):593-9.

Positive modulation of a Cys-loop acetylcholine receptor by an auxiliary transmembrane subunit.
Boulin T, Rapti G, Briseño‑Roa L, Stigloher C, Richmond JE, Paoletti P, Bessereau JL
Nat Neurosci. 2012 Oct. 15(10):1374-81.

Diffusion barriers constrain receptors at synapses.
Renner M, Schweizer C, Bannai H, Triller A, Lévi S
PLoS One. 2012. 7(8):e43032.

Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis.
Bourbousse C, Ahmed I, Roudier F, Zabulon G, Blondet E, Balzergue S, Colot V, Bowler C, Barneche F
PLoS Genet. 2012. 8(7):e1002825.

Biochemical characterization of the RNA helicase UPF1 involved in nonsense-mediated mRNA decay.
Fiorini F, Bonneau F, Le Hir H
Methods Enzymol. 2012. 511:255-74.

Astrocyte-neuron communication : functional consequences.
Ben Achour S, Pascual O
Neurochem Res. 2012 Nov. 37(11):2464-73.

Integration of H-2Z1, a somatosensory cortex-expressed transgene, interferes with the expression of the Satb1 and Tbc1d5 flanking genes and affects the differentiation of a subset of cortical interneurons.
Narboux‑Nême N, Goïame R, Mattéi MG, Cohen‑Tannoudji M, Wassef M
J Neurosci. 2012 May 23. 32(21):7287-300.

NMDA receptors with incomplete Mg²⁺ block enable low-frequency transmission through the cerebellar cortex.
Schwartz EJ, Rothman JS, Dugué GP, Diana M, Rousseau C, Silver RA, Dieudonné S
J Neurosci. 2012 May 16. 32(20):6878-93.

An alternating GluN1-2-1-2 subunit arrangement in mature NMDA receptors.
Riou M, Stroebel D, Edwardson JM, Paoletti P
PLoS One. 2012. 7(4):e35134.

Eoulsan : a cloud computing-based framework facilitating high throughput sequencing analyses.
Jourdren L, Bernard M, Dillies MA, Le Crom S
Bioinformatics. 2012 Jun 1. 28(11):1542-3.

Phox2b expression in the taste centers of fish.
Coppola E, D’autréaux F, Nomaksteinsky M, Brunet JF
J Comp Neurol. 2012 Nov 1. 520(16):3633-49.

Mixed inhibitory synaptic balance correlates with glutamatergic synaptic phenotype in cerebellar unipolar brush cells.
Rousseau CV, Dugué GP, Dumoulin A, Mugnaini E, Dieudonné S, Diana MA
J Neurosci. 2012 Mar 28. 32(13):4632-44.

Iron utilization in marine cyanobacteria and eukaryotic algae.
Morrissey J, Bowler C
Front Microbiol. 2012. 3:43.

Modeling the step of endosomal escape during cell infection by a nonenveloped virus.
Lagache T, Danos O, Holcman D
Biophys J. 2012 Mar 7. 102(5):980-9.

Brownian needle in dire straits : stochastic motion of a rod in very confined narrow domains.
Holcman D, Schuss Z
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jan. 85(1 Pt 1):010103.

Cthrc1 is a negative regulator of myelination in Schwann cells.
Apra C, Richard L, Coulpier F, Blugeon C, Gilardi‑Hebenstreit P, Vallat JM, Lindner V, Charnay P, Decker L
Glia. 2012 Mar. 60(3):393-403.

Intra-nuclear mobility and target search mechanisms of transcription factors : a single-molecule perspective on gene expression.
Normanno D, Dahan M, Darzacq X
Biochim Biophys Acta. 2012 Jun. 1819(6):482-93.

Robustness and flexibility in nematode vulva development.
Félix MA, Barkoulas M
Trends Genet. 2012 Apr. 28(4):185-95.

Chloroplast-mitochondria cross-talk in diatoms.
Prihoda J, Tanaka A, de Paula WB, Allen JF, Tirichine L, Bowler C
J Exp Bot. 2012 Feb. 63(4):1543-57.

Using default constraints of the spindle assembly checkpoint to estimate the associated chemical rates.
Dao Duc K, Holcman D
BMC Biophys. 2012 Jan 19. 5:1.

From genes to function : the C. elegans genetic toolbox.
Boulin T, Hobert O
Wiley Interdiscip Rev Dev Biol. 2012 Jan-Feb. 1(1):114-37.

Microglia activation triggers astrocyte-mediated modulation of excitatory neurotransmission.
Pascual O, Ben Achour S, Rostaing P, Triller A, Bessis A
Proc Natl Acad Sci U S A. 2012 Jan 24. 109(4):E197-205.

Tetrode recordings in the cerebellar cortex.
Gao H, Solages Cd, Lena C
J Physiol Paris. 2012 May-Aug. 106(3-4):128-36.

Evolution and functional diversification of fructose bisphosphate aldolase genes in photosynthetic marine diatoms.
Allen AE, Moustafa A, Montsant A, Eckert A, Kroth PG, Bowler C
Mol Biol Evol. 2012 Jan. 29(1):367-79.

In vitro effect of malachite green on Candida albicans involves multiple pathways and transcriptional regulators UPC2 and STP2.
Dhamgaye S, Devaux F, Manoharlal R, Vandeputte P, Shah AH, Singh A, Blugeon C, Sanglard D, Prasad R
Antimicrob Agents Chemother. 2012 Jan. 56(1):495-506.

Do replication forks control late origin firing in Saccharomyces cerevisiae ?
Ma E, Hyrien O, Goldar A
Nucleic Acids Res. 2012 Mar. 40(5):2010-9.

Detection and quantification through a lipid membrane using the molecularly controlled semiconductor resistor.
Bavli D, Tkachev M, Piwonski H, Capua E, de Albuquerque I, Bensimon D, Haran G, Naaman R
Langmuir. 2012 Jan 10. 28(1):1020-8.

Engrailed homeoprotein recruits the adenosine A1 receptor to potentiate ephrin A5 function in retinal growth cones.
Stettler O, Joshi RL, Wizenmann A, Reingruber J, Holcman D, Bouillot C, Castagner F, Prochiantz A, Moya KL
Development. 2012 Jan. 139(1):215-24.

Confocal microscopy imaging of NR2B-containing NMDA receptors based on fluorescent ifenprodil-like conjugates.
Marchand P, Becerril‑Ortega J, Mony L, Bouteiller C, Paoletti P, Nicole O, Barré L, Buisson A, Perrio C
Bioconjug Chem. 2012 Jan 18. 23(1):21-6.

RSAT peak-motifs : motif analysis in full-size ChIP-seq datasets.
Thomas‑Chollier M, Herrmann C, Defrance M, Sand O, Thieffry D, van Helden J
Nucleic Acids Res. 2012 Feb. 40(4):e31.

Evolution of host life-history traits in a spatially structured host-parasite system.
Débarre F, Lion S, van Baalen M, Gandon S
Am Nat. 2012 Jan. 179(1):52-63.

Single-molecule studies using magnetic traps.
Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V
Cold Spring Harb Protoc. 2012 Jan 1. 2012(1):34-49.

Magnetic trap construction.
Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V
Cold Spring Harb Protoc. 2012 Jan 1. 2012(1):133-8.

Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators.
Michelle L, Cloutier A, Toutant J, Shkreta L, Thibault P, Durand M, Garneau D, Gendron D, Lapointe E, Couture S, Le Hir H, Klinck R, Elela SA, Prinos P, Chabot B
Mol Cell Biol. 2012 Mar. 32(5):954-67.

Mechanism of proton/substrate coupling in the heptahelical lysosomal transporter cystinosin.
Ruivo R, Bellenchi GC, Chen X, Zifarelli G, Sagné C, Debacker C, Pusch M, Supplisson S, Gasnier B
Proc Natl Acad Sci U S A. 2012 Jan 31. 109(5):E210-7.

Synaptic neurotransmitter-gated receptors.
Smart TG, Paoletti P
Cold Spring Harb Perspect Biol. 2012 Mar 1. 4(3).

Role of pleiotropy in the evolution of a cryptic developmental variation in Caenorhabditis elegans.
Duveau F, Félix MA
PLoS Biol. 2012 Jan. 10(1):e1001230.

Evolution of susceptibility to ingested double-stranded RNAs in Caenorhabditis nematodes.
Nuez I, Félix MA
PLoS One. 2012. 7(1):e29811.

Chromosome-scale selective sweeps shape Caenorhabditis elegans genomic diversity.
Andersen EC, Gerke JP, Shapiro JA, Crissman JR, Ghosh R, Bloom JS, Félix MA, Kruglyak L
Nat Genet. 2012 Jan 29. 44(3):285-90.

Life histories have a history : effects of past and present conditions on adult somatic growth rates in wild Trinidadian guppies.
Auer SK, Lopez‑Sepulcre A, Heatherly T 2nd, Kohler TJ, Bassar RD, Thomas SA, Reznick DN
J Anim Ecol. 2012 Jul. 81(4):818-26.

Wavelet analysis for single molecule localization microscopy.
Izeddin I, Boulanger J, Racine V, Specht CG, Kechkar A, Nair D, Triller A, Choquet D, Dahan M, Sibarita JB
Opt Express. 2012 Jan 30. 20(3):2081-95.

Establishment of myelinating Schwann cells and barrier integrity between central and peripheral nervous systems depend on Sox10.
Fröb F, Bremer M, Finzsch M, Kichko T, Reeh P, Tamm ER, Charnay P, Wegner M
Glia. 2012 May. 60(5):806-19.

ATP-independent cooperative binding of yeast Isw1a to bare and nucleosomal DNA.
De Cian A, Praly E, Ding F, Singh V, Lavelle C, Le Cam E, Croquette V, Piétrement O, Bensimon D
PLoS One. 2012. 7(2):e31845.

Phylogenetic reconstruction and shell evolution of the Diplommatinidae (Gastropoda : Caenogastropoda).
Webster NB, Van Dooren TJ, Schilthuizen M
Mol Phylogenet Evol. 2012 Jun. 63(3):625-38.

Adaptation of granule cell to Purkinje cell synapses to high-frequency transmission.
Valera AM, Doussau F, Poulain B, Barbour B, Isope P
J Neurosci. 2012 Feb 29. 32(9):3267-80.

Tye7 regulates yeast Ty1 retrotransposon sense and antisense transcription in response to adenylic nucleotides stress.
Servant G, Pinson B, Tchalikian‑Cosson A, Coulpier F, Lemoine S, Pennetier C, Bridier‑Nahmias A, Todeschini AL, Fayol H, Daignan‑Fornier B, Lesage P
Nucleic Acids Res. 2012 Jul. 40(12):5271-82.

Predation-associated differences in sex linkage of wild guppy coloration.
Gordon SP, López‑Sepulcre A, Reznick DN
Evolution. 2012 Mar. 66(3):912-8.

The structure of the ASAP core complex reveals the existence of a Pinin-containing PSAP complex.
Murachelli AG, Ebert J, Basquin C, Le Hir H, Conti E
Nat Struct Mol Biol. 2012 Mar 4. 19(4):378-86.

Single-molecule mechanical identification and sequencing.
Ding F, Manosas M, Spiering MM, Benkovic SJ, Bensimon D, Allemand JF, Croquette V
Nat Methods. 2012 Mar 11. 9(4):367-72.

PSF shaping using adaptive optics for three-dimensional single-molecule super-resolution imaging and tracking.
Izeddin I, El Beheiry M, Andilla J, Ciepielewski D, Darzacq X, Dahan M
Opt Express. 2012 Feb 27. 20(5):4957-67.

Perispeckles are major assembly sites for the exon junction core complex.
Daguenet E, Baguet A, Degot S, Schmidt U, Alpy F, Wendling C, Spiegelhalter C, Kessler P, Rio MC, Le Hir H, Bertrand E, Tomasetto C
Mol Biol Cell. 2012 May. 23(9):1765-82.

Long-term species, sexual and individual variations in foraging strategies of fur seals revealed by stable isotopes in whiskers.
Kernaléguen L, Cazelles B, Arnould JP, Richard P, Guinet C, Cherel Y
PLoS One. 2012. 7(3):e32916.

Mechanism of strand displacement synthesis by DNA replicative polymerases.
Manosas M, Spiering MM, Ding F, Bensimon D, Allemand JF, Benkovic SJ, Croquette V
Nucleic Acids Res. 2012 Jul. 40(13):6174-86.

Leveraging metabolomics for functional investigations in sequenced marine diatoms.
Fernie AR, Obata T, Allen AE, Araújo WL, Bowler C
Trends Plant Sci. 2012 Jul. 17(7):395-403.

Replication fork polarity gradients revealed by megabase-sized U-shaped replication timing domains in human cell lines.
Baker A, Audit B, Chen CL, Moindrot B, Leleu A, Guilbaud G, Rappailles A, Vaillant C, Goldar A, Mongelard F, d’Aubenton‑Carafa Y, Hyrien O, Thermes C, Arneodo A
PLoS Comput Biol. 2012. 8(4):e1002443.

Homozygous deletion of an EGR2 enhancer in congenital amyelinating neuropathy.
Funalot B, Topilko P, Arroyo MA, Sefiani A, Hedley‑Whyte ET, Yoldi ME, Richard L, Touraille E, Laurichesse M, Khalifa E, Chauzeix J, Ouedraogo A, Cros D, Magdelaine C, Sturtz FG, Urtizberea JA, Charnay P, Bragado FG, Vallat JM
Ann Neurol. 2012 May. 71(5):719-23.

The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1.
Mocquet V, Neusiedler J, Rende F, Cluet D, Robin JP, Terme JM, Duc Dodon M, Wittmann J, Morris C, Le Hir H, Ciminale V, Jalinot P
J Virol. 2012 Jul. 86(14):7530-43.

Synaptic structure and function.
Triller A, Sheng M
Curr Opin Neurobiol. 2012 Jun. 22(3):363-5.

Allosteric inhibition of individual enzyme molecules trapped in lipid vesicles.
Piwonski HM, Goomanovsky M, Bensimon D, Horovitz A, Haran G
Proc Natl Acad Sci U S A. 2012 May 29. 109(22):E1437-43.

Gephyrin-independent GABA(A)R mobility and clustering during plasticity.
Niwa F, Bannai H, Arizono M, Fukatsu K, Triller A, Mikoshiba K
PLoS One. 2012. 7(4):e36148.

Identification of Chinese plague foci from long-term epidemiological data.
Ben‑Ari T, Neerinckx S, Agier L, Cazelles B, Xu L, Zhang Z, Fang X, Wang S, Liu Q, Stenseth NC
Proc Natl Acad Sci U S A. 2012 May 22. 109(21):8196-201.

The fundamental role of competition in the ecology and evolution of mutualisms.
Jones EI, Bronstein JL, Ferrière R
Ann N Y Acad Sci. 2012 May. 1256:66-88.

Characterisation of alleles of tomato light signalling genes generated by TILLING.
Jones MO, Piron‑Prunier F, Marcel F, Piednoir‑Barbeau E, Alsadon AA, Wahb‑Allah MA, Al‑Doss AA, Bowler C, Bramley PM, Fraser PD, Bendahmane A
Phytochemistry. 2012 Jul. 79:78-86.

miR-9 controls the timing of neurogenesis through the direct inhibition of antagonistic factors.
Coolen M, Thieffry D, Drivenes Ø, Becker TS, Bally‑Cuif L
Dev Cell. 2012 May 15. 22(5):1052-64.

Evolution of neutral and flowering genes along pearl millet (Pennisetum glaucum) domestication.
Lakis G, Navascués M, Rekima S, Simon M, Remigereau MS, Leveugle M, Takvorian N, Lamy F, Depaulis F, Robert T
PLoS One. 2012. 7(5):e36642.

Mutations in the GlyT2 gene (SLC6A5) are a second major cause of startle disease.
Carta E, Chung SK, James VM, Robinson A, Gill JL, Remy N, Vanbellinghen JF, Drew CJ, Cagdas S, Cameron D, Cowan FM, Del Toro M, Graham GE, Manzur AY, Masri A, Rivera S, Scalais E, Shiang R, Sinclair K, Stuart CA, Tijssen MA, Wise G, Zuberi SM, Harvey K, Pearce BR, Topf M, Thomas RH, Supplisson S, Rees MI, Harvey RJ
J Biol Chem. 2012 Aug 17. 287(34):28975-85.

Central antihypertensive effects of orally active aminopeptidase A inhibitors in spontaneously hypertensive rats.
Marc Y, Gao J, Balavoine F, Michaud A, Roques BP, Llorens‑Cortes C
Hypertension. 2012 Aug. 60(2):411-8.

Apelin and vasopressin : two work better than one.
Llorens‑Cortes C, Moos F
J Neuroendocrinol. 2012 Jul. 24(7):1085-6.

Population dynamics and habitat sharing of natural populations of Caenorhabditis elegans and C. briggsae.
Félix MA, Duveau F
BMC Biol. 2012 Jun 25. 10:59.

Direct and indirect ecosystem effects of evolutionary adaptation in the Trinidadian guppy (Poecilia reticulata).
Bassar RD, Ferriere R, López‑Sepulcre A, Marshall MC, Travis J, Pringle CM, Reznick DN
Am Nat. 2012 Aug. 180(2):167-85.

Multicolor two-photon tissue imaging by wavelength mixing.
Mahou P, Zimmerley M, Loulier K, Matho KS, Labroille G, Morin X, Supatto W, Livet J, Débarre D, Beaurepaire E
Nat Methods. 2012 Jul 8. 9(8):815-8.

Transmission multigénérationnelle de l’interférence à l’ARN chez le nématode Caenorhabditis elegans.
Bélicard T, Félix MA
Med Sci (Paris). 2012 Jun-Jul. 28(6-7):574-7.

Calcium rubies : a family of red-emitting functionalizable indicators suitable for two-photon Ca2+ imaging.
Collot M, Loukou C, Yakovlev AV, Wilms CD, Li D, Evrard A, Zamaleeva A, Bourdieu L, Léger JF, Ropert N, Eilers J, Oheim M, Feltz A, Mallet JM
J Am Chem Soc. 2012 Sep 12. 134(36):14923-31.

Monogalactopyranosides of fluorescein and fluorescein methyl ester : synthesis, enzymatic hydrolysis by biotnylated β-galactosidase, and determination of translational diffusion coefficient.
Mandal PK, Cattiaux L, Bensimon D, Mallet JM
Carbohydr Res. 2012 Sep 1. 358:40-6.

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs.
Thomas‑Chollier M, Darbo E, Herrmann C, Defrance M, Thieffry D, van Helden J
Nat Protoc. 2012 Jul 26. 7(8):1551-68.

Monitoring microbial population dynamics at low densities.
Julou T, Desprat N, Bensimon D, Croquette V
Rev Sci Instrum. 2012 Jul. 83(7):074301.

Spatiotemporal manipulation of retinoic acid activity in zebrafish hindbrain development via photo-isomerization.
Xu L, Feng Z, Sinha D, Ducos B, Ebenstein Y, Tadmor AD, Gauron C, Le Saux T, Lin S, Weiss S, Vriz S, Jullien L, Bensimon D
Development. 2012 Sep. 139(18):3355-62.

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.
Dhamgaye S, Bernard M, Lelandais G, Sismeiro O, Lemoine S, Coppée JY, Le Crom S, Prasad R, Devaux F
BMC Genomics. 2012 Aug 16. 13:396.

Autonomic neurocristopathy-associated mutations in PHOX2B dysregulate Sox10 expression.
Nagashimada M, Ohta H, Li C, Nakao K, Uesaka T, Brunet JF, Amiel J, Trochet D, Wakayama T, Enomoto H
J Clin Invest. 2012 Sep. 122(9):3145-58.

NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.
Pontier D, Picart C, Roudier F, Garcia D, Lahmy S, Azevedo J, Alart E, Laudié M, Karlowski WM, Cooke R, Colot V, Voinnet O, Lagrange T
Mol Cell. 2012 Oct 12. 48(1):121-32.

Eco-evolutionary community dynamics : covariation between diversity and invasibility across temperature gradients.
Stegen JC, Enquist BJ, Ferrière R
Am Nat. 2012 Oct. 180(4):E110-26.

MeDIP-HMM : genome-wide identification of distinct DNA methylation states from high-density tiling arrays.
Seifert M, Cortijo S, Colomé‑Tatché M, Johannes F, Roudier F, Colot V
Bioinformatics. 2012 Nov 15. 28(22):2930-9.

Computation of the mean first-encounter time between the ends of a polymer chain.
Amitai A, Kupka I, Holcman D
Phys Rev Lett. 2012 Sep 7. 109(10):108302.

Collective mesendoderm migration relies on an intrinsic directionality signal transmitted through cell contacts.
Dumortier JG, Martin S, Meyer D, Rosa FM, David NB
Proc Natl Acad Sci U S A. 2012 Oct 16. 109(42):16945-50.

Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging.
Hoze N, Nair D, Hosy E, Sieben C, Manley S, Herrmann A, Sibarita JB, Choquet D, Holcman D
Proc Natl Acad Sci U S A. 2012 Oct 16. 109(42):17052-7.

ncPRO-seq : a tool for annotation and profiling of ncRNAs in sRNA-seq data.
Chen CJ, Servant N, Toedling J, Sarazin A, Marchais A, Duvernois‑Berthet E, Cognat V, Colot V, Voinnet O, Heard E, Ciaudo C, Barillot E
Bioinformatics. 2012 Dec 1. 28(23):3147-9.

Epialleles in plant evolution.
Weigel D, Colot V
Genome Biol. 2012 Oct 11. 13(10):249.

The Paramecium germline genome provides a niche for intragenic parasitic DNA : evolutionary dynamics of internal eliminated sequences.
Arnaiz O, Mathy N, Baudry C, Malinsky S, Aury JM, Denby Wilkes C, Garnier O, Labadie K, Lauderdale BE, Le Mouël A, Marmignon A, Nowacki M, Poulain J, Prajer M, Wincker P, Meyer E, Duharcourt S, Duret L, Bétermier M, Sperling L
PLoS Genet. 2012. 8(10):e1002984.

New partners in regulation of gene expression : the enhancer of Trithorax and Polycomb Corto interacts with methylated ribosomal protein l12 via its chromodomain.
Coléno‑Costes A, Jang SM, de Vanssay A, Rougeot J, Bouceba T, Randsholt NB, Gibert JM, Le Crom S, Mouchel‑Vielh E, Bloyer S, Peronnet F
PLoS Genet. 2012. 8(10):e1003006.

Endoneurial fibroblast-like cells.
Richard L, Topilko P, Magy L, Decouvelaere AV, Charnay P, Funalot B, Vallat JM
J Neuropathol Exp Neurol. 2012 Nov. 71(11):938-47.

Synaptic transmission in neurological disorders dissected by a quantitative approach.
Freche D, Lee CY, Rouach N, Holcman D
Commun Integr Biol. 2012 Sep 1. 5(5):448-52.

Direct observation of stalled fork restart via fork regression in the T4 replication system.
Manosas M, Perumal SK, Croquette V, Benkovic SJ
Science. 2012 Nov 30. 338(6111):1217-20.

Caenorhabditis elegans vulval cell fate patterning.
Félix MA
Phys Biol. 2012 Aug. 9(4):045001.

An oblique view on the role of spindle orientation in vertebrate neurogenesis.
Peyre E, Morin X
Dev Growth Differ. 2012 Apr. 54(3):287-305.

Complete genome sequence of Le Blanc virus, a third Caenorhabditis nematode-infecting virus.
Franz CJ, Zhao G, Félix MA, Wang D
J Virol. 2012 Nov. 86(21):11940.

The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1.
Mocquet V, Neusiedler J, Rende F, Cluet D, Robin JP, Terme JM, Duc Dodon M, Wittmann J, Morris C, Le Hir H, Ciminale V, Jalinot P
J Virol. 2012 Jul. 86(14):7530-43.

Perispeckles are major assembly sites for the exon junction core complex.
Daguenet E, Baguet A, Degot S, Schmidt U, Alpy F, Wendling C, Spiegelhalter C, Kessler P, Rio MC, Le Hir H, Bertrand E, Tomasetto C
Mol Biol Cell. 2012 May. 23(9):1765-82.

The structure of the ASAP core complex reveals the existence of a Pinin-containing PSAP complex.
Murachelli AG, Ebert J, Basquin C, Le Hir H, Conti E
Nat Struct Mol Biol. 2012 Mar 4. 19(4):378-86.

Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators.
Michelle L, Cloutier A, Toutant J, Shkreta L, Thibault P, Durand M, Garneau D, Gendron D, Lapointe E, Couture S, Le Hir H, Klinck R, Elela SA, Prinos P, Chabot B
Mol Cell Biol. 2012 Mar. 32(5):954-67.

The Transmission of Genes and Culture : A Questionable Analogy
Claidière N, André JB
Evolutionary Biology. 2012 Mar. 39(1):12-24.

Photoantenna in two cryptochrome–photolyase proteins from O. tauri : Presence, nature and ultrafast photoinduced dynamics
Brazard J, Ley C, Lacombat F, Plaza P, Mony L, Heijde M, Zabulon G, Bowler C,
Journal of Photochemistry and Photobiology A : Chemistry. 2012 Apr 15. 234:135-145.

Coagulation–fragmentation for a finite number of particles and application to telomere clustering in the yeast nucleus
Hozé N, Holcman D
Physics Letters A. 2012 Jan 30. 376(6-7):845-849.

Widespread intraspecific organismal stoichiometry among populations of the Trinidadian guppy
El‑Sabaawi RW, Zandonà E, Kohler TJ, Marshall MC, Moslemi JM, Travis J, López‑Sepulcre A, Ferriére R, Pringle CM, Thomas SA, Reznick DN, Flecker AS
Functional Ecology. 2012 Mar 12. 26(3):666-676.

Analysis of the Mean First Looping Time of a Rod-Polymer
Amitai A, Kupka I, Holcman D
Multiscale Modeling & Simulation. 2012 Jun 7. 10(2):612-632.

Brownian Motion in Dire Straits
Holcman D, Schuss Z
Multiscale Modeling & Simulation. 2012 Oct 18. 10(4):1204-1231.