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Publications / Brevets

Publications

Les articles numérotés ont été évalués par des pairs

95 - Reconstructing Interpretable Features in Computational Super-Resolution microscopy via Regularized Latent Search
M. Gheizari, and A. Genovesio
2024, Biological Imaging doi : doi:10.1017/S2633903X24000084

94 - ChAda-ViT : Channel Adaptive Attention for Joint Representation Learning of Heterogeneous Microscopy Images
N. Bourriez*, I. Bendidi*, E. Cohen*, G. Watkinson, M. Sanchez, G. Bollot, A. Genovesio
2024, CVPR doi : 10.48550/arXiv.2311.15264

93 - Weakly supervised cross-modal learning in high-content screening
G. Watkinson*, E. Cohen*, N. Bourriez, I. Bendidi, G. Bollot, A. Genovesio
2024, IEEE ISBI doi : 10.48550/arXiv.2311.04678

92 - One Style is All you Need to Generate a Video
S. Manandhar, A. Genovesio
2024, IEEE/CVF WACV

91 - Transfer learning for versatile and training free high content screening analyses
M. Corbe, G. Boncompain, F. Perez, E. Del Nery & A. Genovesio
2023, Scientific Reports, doi : 10.1038/s41598-023-49554-8

90 - No Free Lunch in Self Supervised Representation Learning
I. Bendidi, A. Bardes, E. Cohen, A. Lamiable, G. Bollot, A. Genovesio
2023, NeurIPS, Self-Supervised Learning - Theory and Practice

* - PhenDiff : Revealing Invisible Phenotypes with Conditional Diffusion Models
A. Bourou*, T. Boyer*, K. Daupin, V. Dubreuil, A. De Thonel, V. Mezger, A. Genovesio
2023, preprint doi : 10.48550/arXiv.2312.08290

89 - Comprehensive mapping of exon junction complex binding sites reveals universal EJC deposition in Drosophila
L. Morillo, T. Paternina, Q. Alasseur, A. Genovesio, S. Schwartz & H. Le Hir
2023, BMC Biology, doi : 10.1186/s12915-023-01749-1

88 - Choroid plexuses carry nodal-like cilia that undergo axoneme regression from early adult stage
K. Hoa Ho, A. Candat, V. Scarpetta, M. Faucourt, S. Weill, C. Salio, E. D’Este, M. Meschkat, C. A. Wurm, M. Kneussel, C. Janke, M. M. Magiera, A. Genovesio, A. Meunier, M. Sassoè-Pognetto, M. S. Brill, N. Spassky, A. Patrizi
2023, Developmental Cell, doi : 10.1016/j.devcel.2023.10.003

87 - Revealing invisible cell phenotypes with conditional generative modeling
A. Lamiable*, T. Champetier*, F. Leonardi, E. Cohen, P. Sommer, D. Hardy, N. Argy, A. Massougbodji, E. Del Nery, G. Cottrell, Y.-J. Kwon, A. Genovesio
2023, Nature communications, doi : 10.1038/s41467-023-42124-6

86 - Cell painting transfer increases screening hit rate
E. Cohen, M. Corbe, C. A. Franco, F. F. Vasconcelos, F. Perez, E. Del Nery, G. Bollot and A. Genovesio
2023, Biological Imaging, doi : 10.1017/S2633903X23000077

85 - Evolution is not uniform along coding sequences
R. Bricout, D. Weil, D. Stroebel, A. Genovesio, H. Roest Crollius
2023, Molecular Biology and Evolution, doi : 10.1093/molbev/msad042

84 - The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases
A. Hoguin, F. Yang, A. Groisillier, C. Bowler, A. Genovesio, O. Ait-Mohamed, F. Rocha Jimenez Vieira, L. Tirichine
2023, Communications Biology, doi : 10.1038/s42003-023-04629-0

83 - Super-Resolution through StyleGAN Regularized Latent Search
M. Gheizari, and A. Genovesio
2022, NeurIPS, Self-Supervised Learning - Theory and Practice

82 - Unpaired Image-to-Image Translation with Limited Data to Reveal Subtle Phenotypes
A. Bourou, K. Daupin, V. Dubreuil, A. De Thonel, V. Lallemand-Mezger, and A. Genovesio
2022, NeurIPS, Self-Supervised Learning - Theory and Practice

81 - Comparison of semi-supervised learning methods for High Content Screening quality control
U. Masud∗, E. Cohen∗, I. Bendidi, G. Bollot, and A. Genovesio
2022, ECCV, doi : 10.1007/978-3-031-25069-9_26

80 - SAVGAN : Self-Attention based Generation of Tumour on Chip videos
S. Manandhar, I. Veith, M.-C. Parrini, A. Genovesio
2022, IEEE ISBI, pp. 1-5, doi : 10.1109/ISBI52829.2022.9761518

79 - Non-convex cell epithelial modeling unveils cellular interactions
E. Laruelle and A. Genovesio
2022, IEEE ISBI, pp. 1-5, doi : 10.1109/ISBI52829.2022.9761452

78 - A medullary centre for lapping in mice
B. Dempsey, S. Sungeelee, P. Bokiniec, Z. Chettouh, S. Diem, S. Autran, E. R. Harrell, J. F. A. Poulet, C. Birchmeier, H. Carey, A. Genovesio, S. McMullan, C. Goridis, G. Fortin, J.-F. Brunet
2021, Nature Communications , doi : 10.1038/s41467-021-26275-y

77 - Objective Comparison of High Throughput qPCR Data Analysis Methods
M. Bahin, M. Delagrange, Q. Viautour, J. Pouch, A. Ali Chaouche, B. Ducos and A. Genovesio
2021, J Appl Bioinformat Computat Biol S Vol : 10 Issue : 4

76 - Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum
X. Zhao, A. Rastogi, A. F. D. Cabanillas, O. Ait Mohamed, C. Cantrel, B. Lombard, O. Murik, A. Genovesio, C. Bowler, D. Bouyer, D. Loew, X. Lin, A. Veluchamy, F. R. J. Vieira, L. Tirichine
2021, New Phytologist, doi:10.1111/nph.17129

75 - Unraveling spatial cellular pattern by computational tissue shuffling
E. Laruelle, N. Spassky, A. Genovesio
2020, Communications Biology, doi : 10.1038/s42003-020-01323-3

74 - In vivo large-scale analysis of Drosophila neuronal calcium traces by automated tracking of single somata
F Delestro*, L Scheunemann*, M Pedrezzani, P Tchenio, T Preat, A Genovesio
2020, Scientific Reports, doi : 10.1038/s41598-020-64060-x

73 - Artificially decreasing cortical tension generates aneuploidy in mouse oocytes
I Bennabi, F Crozet, E Nikalayevich, A Chaigne, G Letort, M Manil-Ségalen, C Campillo, C Cadart, A Othmani, R Attia, A Genovesio, M-H Verlhac, M-E Terret
2020, Nature communications, doi : 10.1038/s41467-020-15470-y

72 - Coordination of transcriptional and translational regulations in human cells infected by Listeria monocytogenes
V. Besic, F. Habibolahi*, B. Noël*, S. Rupp, A. Genovesio and A. Lebreton
2020, RNA Biology, doi : 10.1080/15476286.2020.1777380.

71 - PhaeoNet : a holistic RNAseq-based portrait of transcriptional coordination in the model diatom Phaeodactylum tricornutum
O Ait-Mohamed, AMG Novák Vanclová, N Joli, Y Liang, X Zhao, A Genovesio, L Tirichine, C Bowler, R Dorrell
2020, Front. Plant Sci. doi : 10.3389/fpls.2020.590949

70 - PySpacell : A Python Package for Spatial Analysis of Cell Images.
F Rose, L Rappez, SH Triana, T Alexandrov, A Genovesio
2019, Cytometry Part A, doi : 10.1002/cyto.a.23955

69 - Active Fluctuations of the Nuclear Envelope Shape the Transcriptional Dynamics in Oocytes
M Almonacid, A Al Jord, S El-Hayek, A Othmani, F Coulpier, S Lemoine, K Miyamoto, R Grosse, C Klein, T Piolot, P Mailly, R Voituriez, A Genovesio, M-H Verlhac
2019, Developmental Cell, doi:10.1016/j.devcel.2019.09.010

68 - m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants
L Yang, V Perrera, E Saplaoura, F Apelt, M Bahin, A Kramdi, J Olas, B Mueller-Roeber, E Sokolowska, W Zhang, R Li, N Pitzalis, M Heinlein, S Zhang, A Genovesio, V Colot, F Kragler
2019, Current Biology, doi:10.1016/j.cub.2019.06.042

67 - ALFA : annotation landscape for aligned reads
M Bahin*, B F Noel*, V Murigneux, C Bernard, L Bastianelli, H Le Hir, A Lebreton, A Genovesio
2019, BMC Genomics, doi:10.1186/s12864-019-5624-2

66 - Adult Neural Stem Cells and Multiciliated Ependymal Cells Share a Common Lineage Regulated by the Geminin Family Members
Ortiz-Álvarez G*, Daclin M*, Shihavuddin A, Lansade P, Fortoul A, Faucourt M, Clavreul S, Lalioti ME, Taraviras S, Hippenmeyer S, Livet J, Meunier A, Genovesio A, Spassky N
2019 Neuron, doi.org/10.1016/j.neuron.2019.01.051.

65 - Monitored eCLIP : high accuracy mapping of RNA-protein interactions
R Hocq*, J Paternina*, Q Alasseur, A Genovesio, H Le Hir
2018, Nucleic Acid Research, doi.org/10.1093/nar/gky858

64 - High‐Throughput Optical Mapping of Replicating DNA
F De Carli*, N Menezes*, W Berrabah, V Barbe, A Genovesio, O Hyrien
2018, Small Methods, doi.org/10.1002/smtd.201800146

63 - DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis
A Nassrallah, M Rougée, C Bourbousse, S Drevensek, S Fonseca, E Iniesto, O Ait-Mohamed, A-F Deton-Cabanillas, G Zabulon, I Ahmed, D Stroebel, V Masson, B Lombard, D Eeckhout, K Gevaert, D Loew, A Genovesio, C Breyton, G de Jaeger, C Bowler, V Rubio, F Barneche
2018, eLIFE, doi:10.7554/eLife.37892

62 - FastSME : faster and smoother manifold extraction from 3D stack
S Basu, E Rexhepaj, N Spassky, A Genovesio, R R Paulsen, ASM Shihavuddin
2018, IEEE Computer Vision and Pattern Recognition Conference (CVPR)

61 - Ependymal cilia beating induces an actin network to protect centrioles against shear stress
A Mahuzier, A Shihavuddin, C Fournier, P Lansade, M Faucourt, N Menezes, A Meunier, M Garfa-Traoré, M-F Carlier, R Voituriez, A Genovesio, N Spassky, N Delgehyr
2018, Nature Communications, doi:doi.org/10.1038/s41467-018-04676-w

60 - Compound Functional Prediction Using Multiple Unrelated Morphological Profiling Assays
F Rose*, S Basu*, E Rexhepaj, A Chauchereau, E Del Nery, A Genovesio
2017, SLAS Technology, doi:10.1177/2472630317740831

59 - Calibrated mitotic oscillator drives motile ciliogenesis
A Al Jord, A Shihavuddin, R Servignat d’Aout, M Faucourt, A Genovesio, A Karaiskou, J Sobczak-Thépot, N Spassky, A Meunier
2017, Science, doi : 10.1126/science.aan8311

58 - Smooth 2D manifold extraction from 3D image stack
A Shihavuddin*, S Basu*, E Rexhepaj, F Delestro, N Menezes, SM Sigoillot, E Del Nery, F Selimi, N Spassky, A Genovesio
2017, Nature Communications, doi:10.1038/ncomms15554

57 - An RNAi Screen in a Novel Model of Oriented Divisions Identifies the Actin-Capping Protein Z β as an Essential Regulator of Spindle Orientation
F di Pietro, L Valon, Y Li, R Goïame, A Genovesio, X Morin
2017, Current Biology, Volume 27, Issue 16, 21 August, Pages 2452-2464.e8 doi.org/10.1016/j.cub.2017.06.055

56 - Translation in astrocyte distal processes sets molecular heterogeneity at the gliovascular interface
Boulay AC, Saubaméa B, Adam N, Chasseigneaux S, Mazaré N, Gilbert A, Bahin M, Bastianelli L, Blugeon C, Perrin S, Pouch J, Ducos B, Le Crom S, Genovesio A, Chrétien F, Declèves X, Laplanche JL, Cohen-Salmon M.
2017 Cell Discov. doi : 10.1038/celldisc.2017.5

55 - mTORC1 signaling and primary cilia are required for brain ventricle morphogenesis
P Foerster, M Daclin, A Shihavuddin, M Faucourt, A Boletta, A Genovesio, N Spassky
2016, Development : doi : 10.1242/dev.138271

54 - Detection and tracking of overlapping cell nuclei for large scale mitosis analyses
Y Li*, F Rose*, F di Pietro, X Morin, A Genovesio
2016, BMC bioinformatics 17 (1), 1, doi:10.1186/s12859-016-1030-9

53 - High-throughput in vivo genotoxicity testing : an automated readout system for the somatic mutation and recombination test (SMART)
B Lombardot*, CT Oh*, J Kwak, A Genovesio, M Kang, MAE Hansen, SJ Han
2015, PloS one 10 (4), e0121287

52 - Increasing the content of high-content screening an overview
S Singh, AE Carpenter, A Genovesio
2014, Journal of biomolecular screening 19 (5), 640-650

51 - Dimerization, oligomerization, and aggregation of human amyotrophic lateral sclerosis Copper/Zinc superoxide dismutase 1 protein mutant forms in live cells
J Kim*, H Lee*, JH Lee, D Kwon, A Genovesio, D Fenistein, A Ogier, V Brondani, R Grailhe
2014, Journal of Biological Chemistry 289 (21), 15094-15103

50 - Comparison of methods for image-based profiling of cellular morphological responses to small-molecule treatment
V Ljosa, PD Caie, R ter Horst*, KL Sokolnicki*, EL Jenkins, S Daya, ME Roberts, TR Jones, S Singh, A Genovesio, PA Clemons, NO Carragher, AE Carpenter
2013, Journal of biomolecular screening, 1087057113503553

49 - Development of a multiplex phenotypic cell-based high throughput screening assay to identify novel hepatitis C virus antivirals
HY Kim, X Li, CT Jones, CM Rice, JM Garcia, A Genovesio, MAE Hansen, MP Windisch
2013, Antiviral research 99 (1), 6-11

48 - Transcription Sites Are Developmentally Regulated during the Asexual Cycle of Plasmodium falciparum
CB Moraes, T Dorval, M Contreras-Dominguez, FM Dossin, MAE Hansen, A Genovesio, LH Freitas-Junior
2013, PloS one 8 (2)

47 - An image-based drug susceptibility assay targeting the placental sequestration of Plasmodium falciparum-infected erythrocytes
MJ Ku*, FM Dossin*, MAE Hansen*, A Genovesio, L Ayong, LH Freitas-Junior
2012, PloS one 7 (8), e41765

46 - An image-based high-content screening assay for compounds targeting intracellular Leishmania donovani amastigotes in human macrophages
JL Siqueira-Neto*, S Moon*, J Jang*, G Yang, C Lee, HK Moon, E Chatelain, A Genovesio, J Cechetto, LH Freitas-Junior
2012, PLoS Negl Trop Dis 6 (6), e1671

45 - A high-content subtractive screen for selecting small molecules affecting internalization of GPCRs
YJ Kwon, W Lee, A Genovesio, N Emans
2012, Journal of biomolecular screening 17 (3), 379-385

44 - Quantification of protein interaction in living cells by two‐photon spectral imaging with fluorescent protein fluorescence resonance energy transfer pair devoid of acceptor bleed‐through
J Kim, X Li, MS Kang, KB Im, A Genovesio, R Grailhe
2012, Cytometry Part A 81 (2), 112-119

43 - A novel specific edge effect correction method for RNA interference screenings
JP Carralot, A Ogier, A Boese, A Genovesio, P Brodin, P Sommer, T Dorval
2012, Bioinformatics 28 (2), 261-268

42 - Automated Identification and Analysis of Visual Micro-experiments on Cellular Microarray
A Genovesio
2012, Advances in Bio-Imaging : From Physics to Signal Understanding Issues, 27-33

41 - Automated genome-wide visual profiling of cellular proteins involved in HIV infection
A Genovesio*, YJ Kwon*, MP Windisch*, NY Kim, SY Choi, HC Kim, S Jung, F Mammano, V Perrin, AS Boese, N Casartelli, O Schwartz, U Nehrbass, N Emans
2011, Journal of biomolecular screening 16 (9), 945-958

40 - A method for discontinuous neurite reconstruction based on diffusion tensor, Hessian eigenvector, and diffused gradient vector fields
HC Kim, G Stamon, A Genovesio
2011, ICIP. Proceedings of the 18th IEEE International Conference on Image Processing, 1401-1404

39 - Visual genome-wide RNAi screening to identify human host factors required for Trypanosoma cruzi infection
A Genovesio*, MA Giardini*, YJ Kwon*, F de Macedo Dossin, SY Choi, NY Kim, HC Kim, SY Jung, S Schenkman, IC Almeida, N Emans, LH Freitas-Junior
2011, PLoS One 6 (5), e19733

38 - 3D Detection of Mutant Hairs in Drosophila Wing Images
J Kwak, CT Oh, SJ Han, M Hansen, A. Genovesio, M Kang
2011, Journal of the Korean Society for Industrial and Applied Mathematics Vol. 6 No. 1 6 (1), 221-224

37 - A modified fluorescence in situ hybridization protocol for Plasmodium falciparum greatly improves nuclear architecture conservation
M Contreras-Dominguez*, CB Moraes*, T Dorval, A Genovesio, F de Macedo Dossin, LH Freitas-Junior
2010, Molecular and biochemical parasitology 173 (1), 48-52

36 - High content phenotypic cell-based visual screen identifies Mycobacterium tuberculosis acyltrehalose-containing glycolipids involved in phagosome remodeling
P Brodin*, Y Poquet*, F Levillain*, I Peguillet*, G Larrouy-Maumus, M Gilleron, F Ewann, T Christophe, D Fenistein, J Jang, MS Jang, SJ Park, J Rauzier, JP Carralot, R Shrimpton, A Genovesio, JA Gonzalo-Asensio, G Puzo, C Martin, R Brosch, GR Stewart, B Gicquel, O Neyrolles
2010, PLoS Pathog 6 (9), e1001100

35 - Contextual automated 3D analysis of subcellular organelles adapted to high-content screening
T Dorval, A Ogier, A Genovesio, HK Lim, JH Lee, HJ Worman, W Dauer, R Grailhe
2010, Journal of biomolecular screening 15 (7), 847-857

34 - Antileishmanial high-throughput drug screening reveals drug candidates with new scaffolds
JL Siqueira-Neto*, OR Song*, H Oh*, JH Sohn, G Yang, J Nam, J Jang, J Cechetto, CB Lee, S Moon, A Genovesio, E Chatelain, T Christophe, LH Freitas-Junior
2010, PLoS Negl Trop Dis 4 (5), e675

33 - Spatially adaptive relaxation for active contour cell segmentation
A Ogier, T Dorval, B Kim, A Genovesio
2010, Proceedings of the 2010 IEEE international conference on Biomedical imaging : from nano to Macro

32 - Hair Separation and Detection in Mutant Drosophila Hair Images
J Kwak, CT Oh, SJ Han, M Kang, A Genovesio
2010, Journal of the Korean Society for Industrial and Applied Mathematics 5 (1)

31 - Active vector graph for regularized tesselation
A Genovesio
2009, ICIP. Proceedings of the 16th IEEE International Conference on Image Processing, 2429-2432

30 - High content screening identifies decaprenyl-phosphoribose 2′ epimerase as a target for intracellular antimycobacterial inhibitors
T Christophe, M Jackson, HK Jeon, D Fenistein, M Contreras-Dominguez, J Kim, A Genovesio, JP Carralot, F Ewann, EH Kim, SY Lee, S Kang, MJ Seo, EJ Park, H Škovierová, H Pham, G Riccardi, JY Nam, L Marsollier, M Kempf, ML Joly-Guillou, T Oh, WK Shin, ZN, U Nehrbass, R Brosch, ST Cole, P Brodin
2009, PLoS Pathog 5 (10), e1000645

29 - In vivo colocalisation of oskar mRNA and trans-acting proteins revealed by quantitative imaging of the Drosophila oocyte
MM Mhlanga*, DP Bratu*, A Genovesio, A Rybarska, N Chenouard, U Nehrbass, JC Olivo-Marin
2009, PloS one 4 (7), e6241

28 - 3D spatial drift correction using Kalman filtering for fluorescence based imaging
T Dorval, CB Moraes, A Ogier, LH Freitas, A Genovesio
2009, ISBI. Proceedings of the IEEE International Symposium on Biomedical Imaging : From Nano to Macro

27 - Automated high-throughput siRNA transfection in raw 264.7 macrophages : a case study for optimization procedure
JP Carralot, TK Kim, B Lenseigne, AS Boese, P Sommer, A Genovesio, P Brodin
2009, Journal of biomolecular screening

26 - Neuron branch detection and description using random walk
HC Kim, A Genovesio
2009, Proceedings of the IEEE Engineering in Medicine and Biology Society.

25 - A fast, fully automated cell segmentation algorithm for high‐throughput and high‐content screening
D Fenistein, B Lenseigne, T Christophe, P Brodin, A Genovesio
2008, Cytometry part A 73 (10), 958-964

24 - Im. Grid, a grid computing approach for image mining of high throughput-high content screening
HK Moon, A Genovesio
2008, Proceedings of the 9th IEEE/ACM International Conference on Grid Computing

23 - Automated nuclear analysis of Leishmania major telomeric clusters reveals changes in their organization during the parasite’s life cycle
FM Dossin*, A Dufour*, E Dusch*, JL Siqueira-Neto, CB Moraes, GS Yang, MI Cano, A Genovesio, LH Freitas-Junior
2008, PloS one 3 (6), e2313

22 - Inhomogeneous deconvolution in a biological images context
A Ogier, T Dorval, A Genovesio
2008, ISBI. Proceedings of the 5th IEEE International Symposium on Biomedical Imaging : From Nano to Macro

21 - Three‐dimensional point spread function model for line‐scanning confocal microscope with high‐aperture objective
E Dusch, T Dorval, N Vincent, M Wachsmuth, A Genovesio
2007, Journal of microscopy 228 (2), 132-138

20 - Bias image correction via stationarity maximization
T Dorval, A Ogier, A Genovesio
2007, MICCAI. Medical Image Computing and Computer-Assisted Intervention, 693-700

19 - 3D automated nuclear morphometric analysis using Active Meshes
A Dufour, JH Lee, N Vincent, R Grailhe, A Genovesio
2007, Pattern Recognition in Bioinformatics, 356-367

18 - 3D fluorescent spots detection in line-scanning confocal microscopy
E Dusch, N Vincent, A Genovesio
2007, ICIP. Proceedings of the IEEE International Conference on Image Processing, 6, VI-241-VI-244

17 - Biased image correction based on empirical mode decomposition
A Ogier, T Dorval, A Genovesio
2007, ICIP 2007. Proceedings of the IEEE International Conference on Image Processing, 1, I-533-I-536

16 - A new color representation for intensity independent pixel classification in confocal microscopy images
B Lenseigne, T Dorval, A Ogier, A Genovesio
2007, Advanced Concepts for Intelligent Vision Systems, 597-606

15 - High-content classification of nucleocytoplasmic import or export inhibitors
YJ Kwon, A Genovesio, NY Kim, HC Kim, S Jung, B David-Watine, U Nehrbass, N Emans
2007, Journal of biomolecular screening

14 - Bias free features detection for high content screening
T Dorval, A Ogier, E Dusch, N Emans, A Genovesio
2007, ISBI. IEEE International Symposium on Biomedical Imaging : From Nano to Macro, 2007.

13 - Support vector machines for automatic detection of tuberculosis bacteria in confocal microscopy images
B Lenseigne, P Brodin, HK Jeon, T Christophe, A Genovesio
2007, ISBI. IEEE International Symposium on Biomedical Imaging : From Nano to Macro, 2007.

12 - 3D Mumford-Shah based active mesh
A Dufour, N Vincent, A Genovesio
2006, Progress in Pattern Recognition, Image Analysis and Applications, 208-217

11 - Automated confocal microscope bias correction
T Dorval, A Genovesio
2006, Information Optics : Proceedings of the 5th International Workshop on Information Optics (WIO’06)

10 - Quantitative four-dimensional tracking of cytoplasmic and nuclear HIV-1 complexes
N Arhel*, A Genovesio*, KA Kim, S Miko, E Perret, JC Olivo-Marin, S Shorte, P Charneau
2006, Nature methods 3 (10), 817-824

9 - Cerebral microcirculation shear stress levels determine Neisseria meningitidis attachment sites along the blood–brain barrier
E Mairey, A Genovesio, E Donnadieu, C Bernard, F Jaubert, E Pinard, J Seylaz, JC Olivo-Marin, X Nassif, G Duménil
2006, The Journal of experimental medicine 203 (8), 1939-1950

8 - SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope
GG Cabal*, A Genovesio*, S Rodriguez-Navarro, C Zimmer, O Gadal, A Lesne, H Buc, F Feuerbach-Fournier, JC Olivo-Marin, E C Hurt, U Nehrbass
2006, Nature 441 (7094), 770-773

7 - Multiple particle tracking in 3-D+ t microscopy : method and application to the tracking of endocytosed quantum dots
A Genovesio, T Liedl, V Emiliani, WJ Parak, M Coppey-Moisan, JC Olivo-Marin
2006, IEEE Transactions on Image Processing, 15 (5), 1062-1070

6 - Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region
P Therizols, C Fairhead, GG Cabal, A Genovesio, JC Olivo-Marin, B Dujon, E Fabre
2006, The Journal of cell biology 172 (2), 189-199

5 - Adaptive gating in Gaussian Bayesian multi-target tracking
A Genovesio, Z Belhassine, JC Olivo-Marin
2004, ICIP. International Conference on Image Processing, 1, 147-150

4 - Split and merge data association filter for dense multi-target tracking
A Genovesio, JC Olivo-Marin
2004, ICPR, Proceedings of the 17th International Conference on Pattern Recognition

3 - Interacting multiple model based method to track moving fluorescent biological spots
A Genovesio, B Zhang, JC Olivo-Marin
2004, ISBI. Proceedings of the IEEE International Symposium on Biomedical Imaging : Nano to Macro.

2 - Tracking of multiple fluorescent biological objects in three dimensional video microscopy
A Genovesio, B Zhang, JC Olivo-Marin
2003, ICIP Proceedings of the International Conference on Image Processing

1 - Tracking fluroescent spots in biological video microscopy
A Genovesio, JC Olivo-Marin
2003, Biomedical Optics 2003, 98-105

Brevets

Anti-infective compounds
P Brodin, T Christophe, Z No, J Kim, A Genovesio, DPC Fenistein, H Jeon, FA Ewann, S Kang, S Lee, MJ Seo, P Eunjung, M Contreras Dominguez, JY Nam, EH Kim
2014, US Patent 8,785,452

Genome Wide Visual Identification of Human Co-Factors of HIV-1 Infection
N Emans, A Genovesio, MP Windisch, YJ Kwon, S Jung, HC Kim, NY Kim, S Yeon
2014, European Patent 2307568, 2011 US Patent app 20110183313

Method and apparatus for imaging of features on a substrate
A Genovesio, N Emans
2014, US Patent 8,692,876

Anti-infective compounds
Z No, J Kim, P Brodin, MJ Seo, YM Kim, J Cechetto, H Jeon, A Genovesio, S Lee, S Kang, FA Ewann, JY Nam, T Christophe, DPC Fenistein, J Heo, J Jiyeon
2013, US Patent 8,865,734

Anti-infective pyrido (1, 2-a) pyrimidines
Z No, J Kim, P Brodin, MJ Seo, P Eunjung, J Cechetto, H Jeon, EH Kim, J Heo, JY Nam, DPC Fenistein, T Christophe, MC Dominguez, A Genovesio, S Lee, S Kang, FA Ewann
2013, US Patent App. 20130012506

Tuberculosis mutants
P Brodin, S. Park, FA Ewann, I. Peguillet, D. Fenistein, T. Christophe, A. Genovesio, O. Neyrolles, F. Levillain B. Gicquel, Y. Pocquet
2011, WO2012031752A2