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Evidence for sequential and increasing activation of replication origins along replication timing gradients in the human genome.
Guilbaud G, Rappailles A, Baker A, Chen CL, Arneodo A, Goldar A, d’Aubenton‑Carafa Y, Thermes C, Audit B, Hyrien O
PLoS Comput Biol. 2011 Dec. 7(12):e1002322.

Syntaxin1A lateral diffusion reveals transient and local SNARE interactions.
Ribrault C, Reingruber J, Petković M, Galli T, Ziv NE, Holcman D, Triller A
J Neurosci. 2011 Nov 30. 31(48):17590-602.

Homeoprotein Phox2b commands a somatic-to-visceral switch in cranial sensory pathways.
D’Autréaux F, Coppola E, Hirsch MR, Birchmeier C, Brunet JF
Proc Natl Acad Sci U S A. 2011 Dec 13. 108(50):20018-23.

C. elegans : la puissance de la simplicité.
Bessereau JL
Ann Pathol. 2011 Nov. 31(5 Suppl):S60-2.

Genome engineering by transgene-instructed gene conversion in C. elegans.
Robert VJ, Bessereau JL
Methods Cell Biol. 2011. 106:65-88.

Single myelin fiber imaging in living rodents without labeling by deep optical coherence microscopy.
Ben Arous J, Binding J, Léger JF, Casado M, Topilko P, Gigan S, Boccara AC, Bourdieu L
J Biomed Opt. 2011 Nov. 16(11):116012.

The residence time of GABA(A)Rs at inhibitory synapses is determined by direct binding of the receptor α1 subunit to gephyrin.
Mukherjee J, Kretschmannova K, Gouzer G, Maric HM, Ramsden S, Tretter V, Harvey K, Davies PA, Triller A, Schindelin H, Moss SJ
J Neurosci. 2011 Oct 12. 31(41):14677-87.

Lateral diffusion on tubular membranes : quantification of measurements bias.
Renner M, Domanov Y, Sandrin F, Izeddin I, Bassereau P, Triller A
PLoS One. 2011. 6(9):e25731.

Physiological roles of microglia during development.
Pont‑Lezica L, Béchade C, Belarif‑Cantaut Y, Pascual O, Bessis A
J Neurochem. 2011 Dec. 119(5):901-8.

Transcription factor search for a DNA promoter in a three-state model.
Reingruber J, Holcman D
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Aug. 84(2 Pt 1):020901.

Inhibiting eukaryotic transcription : Which compound to choose ? How to evaluate its activity ?
Bensaude O
Transcription. 2011 May. 2(3):103-108.

Identification of the sites of action of SrmB, a DEAD-box RNA helicase involved in Escherichia coli ribosome assembly.
Proux F, Dreyfus M, Iost I
Mol Microbiol. 2011 Oct. 82(2):300-11.

Regulation of glycine receptor diffusion properties and gephyrin interactions by protein kinase C.
Specht CG, Grünewald N, Pascual O, Rostgaard N, Schwarz G, Triller A
EMBO J. 2011 Aug 9. 30(18):3842-53.

Late emergence of the vibrissa direction selectivity map in the rat barrel cortex.
Kremer Y, Léger JF, Goodman D, Brette R, Bourdieu L
J Neurosci. 2011 Jul 20. 31(29):10689-700.

Mitotic spindle orientation in asymmetric and symmetric cell divisions during animal development.
Morin X, Bellaïche Y
Dev Cell. 2011 Jul 19. 21(1):102-19.

Molecular basis of positive allosteric modulation of GluN2B NMDA receptors by polyamines.
Mony L, Zhu S, Carvalho S, Paoletti P
EMBO J. 2011 Jun 17. 30(15):3134-46.

Microscopies cellulaires à l’échelle de la molécule individuelle.
Izeddin I, Darzacq X, Dahan M
Med Sci (Paris). 2011 May. 27(5):547-52.

Physiological and molecular evidence that environmental changes elicit morphological interconversion in the model diatom Phaeodactylum tricornutum.
De Martino A, Bartual A, Willis A, Meichenin A, Villazán B, Maheswari U, Bowler C
Protist. 2011 Jul. 162(3):462-81.

Genome-wide evidence for local DNA methylation spreading from small RNA-targeted sequences in Arabidopsis.
Ahmed I, Sarazin A, Bowler C, Colot V, Quesneville H
Nucleic Acids Res. 2011 Sep 1. 39(16):6919-31.

Replication-fork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts.
Le Breton C, Hennion M, Arimondo PB, Hyrien O
PLoS One. 2011 Apr 15. 6(4):e18554.

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis.
Roudier F, Ahmed I, Bérard C, Sarazin A, Mary‑Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois‑Berthet E, Al‑Shikhley L, Giraut L, Després B, Drevensek S, Barneche F, Dèrozier S, Brunaud V, Aubourg S, Schnittger A, Bowler C, Martin‑Magniette ML, Robin S, Caboche M, Colot V
EMBO J. 2011 May 18. 30(10):1928-38.

Functional reconstitution of Haemonchus contortus acetylcholine receptors in Xenopus oocytes provides mechanistic insights into levamisole resistance.
Boulin T, Fauvin A, Charvet CL, Cortet J, Cabaret J, Bessereau JL, Neveu C
Br J Pharmacol. 2011 Nov. 164(5):1421-32.

Brain refractive index measured in vivo with high-NA defocus-corrected full-field OCT and consequences for two-photon microscopy.
Binding J, Ben Arous J, Léger JF, Gigan S, Boccara C, Bourdieu L
Opt Express. 2011 Mar 14. 19(6):4833-47.

Decoding algal genomes : tracing back the history of photosynthetic life on Earth.
Tirichine L, Bowler C
Plant J. 2011 Apr. 66(1):45-57.

The presynaptic dense projection of the Caenorhabditis elegans cholinergic neuromuscular junction localizes synaptic vesicles at the active zone through SYD-2/liprin and UNC-10/RIM-dependent interactions.
Stigloher C, Zhan H, Zhen M, Richmond J, Bessereau JL
J Neurosci. 2011 Mar 23. 31(12):4388-96.

Molecular basis of NMDA receptor functional diversity.
Paoletti P
Eur J Neurosci. 2011 Apr. 33(8):1351-65.

Nitric oxide regulates astrocyte maturation in the hippocampus : involvement of NOS2.
Béchade C, Pascual O, Triller A, Bessis A
Mol Cell Neurosci. 2011 Apr. 46(4):762-9.

The conserved factor DE-ETIOLATED 1 cooperates with CUL4-DDB1DDB2 to maintain genome integrity upon UV stress.
Castells E, Molinier J, Benvenuto G, Bourbousse C, Zabulon G, Zalc A, Cazzaniga S, Genschik P, Barneche F, Bowler C
EMBO J. 2011 Mar 16. 30(6):1162-72.

Dok4 is involved in Schwann cell myelination and axonal interaction in vitro.
Blugeon C, Le Crom S, Richard L, Vallat JM, Charnay P, Decker L
Glia. 2011 Mar. 59(3):351-62.

Barhl2 limits growth of the diencephalic primordium through Caspase3 inhibition of beta-catenin activation.
Juraver‑Geslin HA, Ausseil JJ, Wassef M, Durand BC
Proc Natl Acad Sci U S A. 2011 Feb 8. 108(6):2288-93.

A single immunoglobulin-domain protein required for clustering acetylcholine receptors in C. elegans.
Rapti G, Richmond J, Bessereau JL
EMBO J. 2011 Feb 16. 30(4):706-18.

Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling.
Bouhouche K, Gout JF, Kapusta A, Bétermier M, Meyer E
Nucleic Acids Res. 2011 May. 39(10):4249-64.

Screening for genes that wire the cerebral cortex.
Lokmane L, Garel S
BMC Biol. 2011 Jan 7. 9:1.

Heat shock cognate protein 70 regulates gephyrin clustering.
Machado P, Rostaing P, Guigonis JM, Renner M, Dumoulin A, Samson M, Vannier C, Triller A
J Neurosci. 2011 Jan 5. 31(1):3-14.

Krox20 inactivation in the PNS leads to CNS/PNS boundary transgression by central glia.
Coulpier F, Decker L, Funalot B, Vallat JM, Garcia‑Bragado F, Charnay P, Topilko P
Rev Neurol (Paris). 2011 Jan. 167(1):51-6.

Diffusion laws in dendritic spines.
Holcman D, Schuss Z
J Math Neurosci. 2011 Oct 27. 1(1):10.

Hindbrain patterning requires fine-tuning of early krox20 transcription by Sprouty 4.
Labalette C, Bouchoucha YX, Wassef MA, Gongal PA, Le Men J, Becker T, Gilardi‑Hebenstreit P, Charnay P
Development. 2011 Jan. 138(2):317-26.

Stochastic modeling of gene activation and applications to cell regulation.
Malherbe G, Holcman D
J Theor Biol. 2011 Feb 21. 271(1):51-63.

Functional evidence for a twisted conformation of the NMDA receptor GluN2A subunit N-terminal domain.
Stroebel D, Carvalho S, Paoletti P
Neuropharmacology. 2011 Jan. 60(1):151-8.

Evolution and metabolic significance of the urea cycle in photosynthetic diatoms.
Allen AE, Dupont CL, Oborník M, Horák A, Nunes‑Nesi A, McCrow JP, Zheng H, Johnson DA, Hu H, Fernie AR, Bowler C
Nature. 2011 May 12. 473(7346):203-7.

Mobility in geometrically confined membranes.
Domanov YA, Aimon S, Toombes GE, Renner M, Quemeneur F, Triller A, Turner MS, Bassereau P
Proc Natl Acad Sci U S A. 2011 Aug 2. 108(31):12605-10.

Formation and stability of synaptic receptor domains.
Haselwandter CA, Calamai M, Kardar M, Triller A, da Silveira RA
Phys Rev Lett. 2011 Jun 10. 106(23):238104.

Super-resolution dynamic imaging of dendritic spines using a low-affinity photoconvertible actin probe.
Izeddin I, Specht CG, Lelek M, Darzacq X, Triller A, Zimmer C, Dahan M
PLoS One. 2011 Jan 17. 6(1):e15611.

Fgf signaling controls pharyngeal taste bud formation through miR-200 and Delta-Notch activity.
Kapsimali M, Kaushik AL, Gibon G, Dirian L, Ernest S, Rosa FM
Development. 2011 Aug. 138(16):3473-84.

A holistic approach to marine eco-systems biology.
Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels‑Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P
PLoS Biol. 2011 Oct. 9(10):e1001177.

Labeling neuronal membrane receptors with quantum dots.
Lévi S, Dahan M, Triller A
Cold Spring Harb Protoc. 2011 Mar 1. 2011(3):prot5580.

Stemming epigenetics in marine stramenopiles.
Maumus F, Rabinowicz P, Bowler C, Rivarola M
Curr Genomics. 2011 Aug. 12(5):357-70.

Stage-specific biomass overcompensation by juveniles in response to increased adult mortality in a wild fish population.
Ohlberger J, Langangen Ø, Edeline E, Claessen D, Winfield IJ, Stenseth NC, Vøllestad LA
Ecology. 2011 Dec. 92(12):2175-82.

From the stochasticity of molecular processes to the variability of synaptic transmission.
Ribrault C, Sekimoto K, Triller A
Nat Rev Neurosci. 2011 Jun 20. 12(7):375-87.

GABA(A) Receptors : Post-Synaptic Co-Localization and Cross-Talk with Other Receptors.
Shrivastava AN, Triller A, Sieghart W
Front Cell Neurosci. 2011. 5:7.

Regulation of GABA(A) receptor dynamics by interaction with purinergic P2X(2) receptors.
Shrivastava AN, Triller A, Sieghart W, Sarto‑Jackson I
J Biol Chem. 2011 Apr 22. 286(16):14455-68.

Ultrastructural organization of presynaptic terminals.
Siksou L, Triller A, Marty S
Curr Opin Neurobiol. 2011 Apr. 21(2):261-8.

Assessing the localization of centrosomal proteins by PALM/STORM nanoscopy.
Sillibourne JE, Specht CG, Izeddin I, Hurbain I, Tran P, Triller A, Darzacq X, Dahan M, Bornens M
Cytoskeleton (Hoboken). 2011 Nov. 68(11):619-27.

A lateral belt of cortical LGN and NuMA guides mitotic spindle movements and planar division in neuroepithelial cells.
Peyre E, Jaouen F, Saadaoui M, Haren L, Merdes A, Durbec P, Morin X
J Cell Biol. 2011 Apr 4. 193(1):141-54.

Specific and integrated roles of Lmx1a, Lmx1b and Phox2a in ventral midbrain development.
Deng Q, Andersson E, Hedlund E, Alekseenko Z, Coppola E, Panman L, Millonig JH, Brunet JF, Ericson J, Perlmann T
Development. 2011 Aug. 138(16):3399-408.

Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2.
Chakrabarti S, Jayachandran U, Bonneau F, Fiorini F, Basquin C, Domcke S, Le Hir H, Conti E
Mol Cell. 2011 Mar 18. 41(6):693-703.

Replication-associated mutational asymmetry in the human genome.
Chen CL, Duquenne L, Audit B, Guilbaud G, Rappailles A, Baker A, Huvet M, d’Aubenton‑Carafa Y, Hyrien O, Arneodo A, Thermes C
Mol Biol Evol. 2011 Aug. 28(8):2327-37.

Physiological and toxic effects of purine intermediate 5-amino-4-imidazolecarboxamide ribonucleotide (AICAR) in yeast.
Hürlimann HC, Laloo B, Simon‑Kayser B, Saint‑Marc C, Coulpier F, Lemoine S, Daignan‑Fornier B, Pinson B
J Biol Chem. 2011 Sep 2. 286(35):30994-1002.

Ploidy influences cellular responses to gross chromosomal rearrangements in Saccharomyces cerevisiae.
Jung PP, Fritsch ES, Blugeon C, Souciet JL, Potier S, Lemoine S, Schacherer J, de Montigny J
BMC Genomics. 2011 Jun 28. 12:331.

Boundary cap cells are peripheral nervous system stem cells that can be redirected into central nervous system lineages.
Zujovic V, Thibaud J, Bachelin C, Vidal M, Deboux C, Coulpier F, Stadler N, Charnay P, Topilko P, Baron‑Van Evercooren A
Proc Natl Acad Sci U S A. 2011 Jun 28. 108(26):10714-9.

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei : a master regulator of carbon assimilation.
Portnoy T, Margeot A, Linke R, Atanasova L, Fekete E, Sándor E, Hartl L, Karaffa L, Druzhinina IS, Seiboth B, Le Crom S, Kubicek CP
BMC Genomics. 2011 May 27. 12:269.

Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma.
Kubicek CP, Herrera‑Estrella A, Seidl‑Seiboth V, Martinez DA, Druzhinina IS, Thon M, Zeilinger S, Casas‑Flores S, Horwitz BA, Mukherjee PK, Mukherjee M, Kredics L, Alcaraz LD, Aerts A, Antal Z, Atanasova L, Cervantes‑Badillo MG, Challacombe J, Chertkov O, McCluskey K, Coulpier F, Deshpande N, von Döhren H, Ebbole DJ, Esquivel‑Naranjo EU, Fekete E, Flipphi M, Glaser F, Gómez‑Rodríguez EY, Gruber S, Han C, Henrissat B, Hermosa R, Hernández‑Oñate M, Karaffa L, Kosti I, Le Crom S, Lindquist E, Lucas S, Lübeck M, Lübeck PS, Margeot A, Metz B, Misra M, Nevalainen H, Omann M, Packer N, Perrone G, Uresti‑Rivera EE, Salamov A, Schmoll M, Seiboth B, Shapiro H, Sukno S, Tamayo‑Ramos JA, Tisch D, Wiest A, Wilkinson HH, Zhang M, Coutinho PM, Kenerley CM, Monte E, Baker SE, Grigoriev IV
Genome Biol. 2011. 12(4):R40.

Secreted amyloid precursor protein β and secreted amyloid precursor protein α induce axon outgrowth in vitro through Egr1 signaling pathway.
Chasseigneaux S, Dinc L, Rose C, Chabret C, Coulpier F, Topilko P, Mauger G, Allinquant B
PLoS One. 2011 Jan 27. 6(1):e16301.

Differential regulation of the cellulase transcription factors XYR1, ACE2, and ACE1 in Trichoderma reesei strains producing high and low levels of cellulase.
Portnoy T, Margeot A, Seidl‑Seiboth V, Le Crom S, Ben Chaabane F, Linke R, Seiboth B, Kubicek CP
Eukaryot Cell. 2011 Feb. 10(2):262-71.